Melinda keeps the lab running. You can find her at HUH 403, x68062.
Caroline joined the lab in 2023. She earned her Ph.D. in theoretical biophysics at Princeton, working with Bill Bialek. In the Desai Lab, Caroline is using a combination of experimental, theoretical, and computational methods to analyze the structure of high-dimensional genotype-phenotype maps.
Tatiana joined in 2024. She earned her Ph.D. in Cell and Systems Biology at the University of Toronto, working with David Guttman and Darrell Desveaux. In the Desai Lab, she's mapping the coevolutionary dynamics between naturally evolved viral antigens and the human immune response.
Joao earned his Ph.D. in Bioengineering at UC Berkeley, advised by Oskar Hallatschek. He joined the lab in 2024 and is working on how affinity landscapes shape the coevolutionary dynamics of pathogens and the host immune system.
Alief earned a BA in math and biology from Carleton College where they studied microbial evolution in the deep-sea hydrothermal vents before joining the lab in 2019. He is currently studying the co-evolution between viruses and immune cells, especially within the context of ever-changing molecular recognition landscapes.
Misha joined the lab in 2020. She is developing quantitative genetics methods for trait mapping in budding yeast, and conducting experimental evolution to understand the role of spatial structure in promoting adaptation in inhomogeneous environments
Jack joined the lab in 2021. He is working on molecular barcoding methods in the E. coli long-term evolution experiment, and is also broadly interested in evolutionary theory.
Alex joined the lab in 2023 after earning her B.Sc. in Biological Engineering from MIT. She is using computational and synthetic biology approaches to model the evolution of antibodies within the germinal center; her research aims to uncover the extent to which B cell trajectories are constrained during affinity maturation.
Jenya received her specialist degree in bioengineering and bioinformatics from Moscow State University in 2023 and then joined the lab. She is interested in fundamental evolutionary mechanisms and is studying them using artificial evolutionary experiments on yeast.
Shreyas earned his BA in Natural Sciences (Zoology) at the University of Cambridge in 2022, and joined the lab in 2023. He is working on long term experimental evolution in yeast and E. coli, with a focus on evolutionary dynamics, coexistence, and diversification.
Caelan graduated from Kutztown University with a BS in Physics in 2021 and joined the lab in 2023. She develops theoretical models to understand underlying epistatic structure in genotype-phenotype maps and is interested in the dynamics of that structure under different environmental conditions.
Berk A. Alpay
Postdoc, Fontana Lab, Harvard Medical School
Thomas Dupic
Team Leader, Centre d'Immunologie de Marseille-Luminy
Eliot Fenton
Bioinformatics
Shreyas Gopalakrishnan
Postdoc, Petrov Lab, Stanford University
Artur Rego-Costa
Bioinformatics Scientist, Regeneron
Gautam Reddy
Assistant Professor, Princeton
Tanush Jagdish
Consultant, McKinsey
Angela Phillips
Assistant Professor, University of California, San Francisco
Jiseon Min
Postdoc, Kern Lab, University of Oregon
Katherine Lawrence
Scientist, Oxford Nanopore
Milo Johnson
Postdoc, Koskella lab, UC Berkeley
Chris
Bakerlee
Biosecurity
Alex N. Nguyen Ba
Assistant Professor, University of Toronto
Mark Margres
Assistant Professor, University of South Florida
Sudipta Tung
DBT/Wellcome Trust India Alliance Early Career Fellow, Department of Biology, Ashoka University, India
Michael J. McDonald
Assistant Professor, Monash University
Sergey Kryazhimskiy
Associate Professor, University of California, San Diego
J. David van Dyken
Assistant Professor, University of Miami
Gabriel Perron
Assistant Professor, Bard College
Lucy Colwell
Lecturer (Assistant Professor), Cambridge University
Ivana Cvijovic
Lewis-Sigler Fellow, Princeton University
Matthew Melissa
Data Scientist, Google
Ramya Purkanti
Postdoc, Vastenhouw lab, Max-Planck Institute of Molecular Cell Biology and Genetics
Lauren Nicolaisen
Data Scientist, Khan Academy
Benjamin H. Good
Assistant Professor, Stanford University
Elizabeth R. Jerison
Assitant Professor, University of Chicago
Evgeni M. Frenkel
Postdoc, Sabatini Lab, Whitehead Institute
Katya Kosheleva
Bioinformatics Scientist, Invitae
Daniel P. Rice
Postdoc, Novembre Lab, University of Chicago
Jose I. Rojas Echenique
Postdoc, Boone Lab, University of Toronto
Stephen
Martis
Graduate Student, UC Berkeley
Ian Ochs
Graduate Student, Princeton University
Juhee Goyal
Undergraduate, Harvard College
Julian Kates-Harbeck
Team Lead, AI, Kernel
Parris Humphrey
Bioinformatics Scientist, Myriad Genetics